The detailed information of tRNA gene sequence


Sequence ID>WENV170017050
Genome IDBARS01043852
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 122
End posion on genome 48
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atatgatttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCGCTTGCTTCACACGCAAGAGGTCAGAGGTTCAAG
TCCCCTACCGCCCACtt
Downstream region at tRNA end position 
tggtgtacag
Secondary structure (Cloverleaf model)
>WENV170017050	Val	CAC
                   t      ACtt tggtgtacag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T C C C C     A
      T G A        A      | |   | |     A
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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