The detailed information of tRNA gene sequence


Sequence ID>WENV170017078
Genome IDBARS01046722
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 714
End posion on genome 629
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tgtattttgg
tRNA gene sequence 
TCCAGTGTGGCAGAGTGGTAATGTTTCGCACTGTTAATGCGCAGACTTCTTCGGAAGCGT
AGGTTCGATCCCTACCGCTGGAGCCA
Downstream region at tRNA end position 
aaatacattt
Secondary structure (Cloverleaf model)
>WENV170017078	Asn	GTT
                   g      GCCA aaatacattt
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C
                     T + G
                     G - C          C T
                    T     C A T C C     A
        G A        G      | | | | |     G
      T     G A C G       G T A G G     C
      G       | | +                 T T
      G     A T G T
        T A        T     AGACTTCTTCGGAAGC
                    T   C
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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