The detailed information of tRNA gene sequence


Sequence ID>WENV170017082
Genome IDBARS01047308
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 519
End posion on genome 446
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ccataaaaat
tRNA gene sequence
AGGCCAGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCtt
Downstream region at tRNA end position
ggaagcgtat
Secondary structure (Cloverleaf model)
>WENV170017082	Trp	CCA
                   t      GCtt ggaagcgtat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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