The detailed information of tRNA gene sequence


Sequence ID>WENV170017084
Genome IDBARS01047847
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 242
End posion on genome 166
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcatctgctT
tRNA gene sequence 
AGGAGCGTAGCTCAATTTGGCAGAGCACCGGTTTCCAAAACCGGCGGTTGGGGGTTCGAG
TCCCTTCGCTCCTGTCg
Downstream region at tRNA end position 
ttgactgcgt
Secondary structure (Cloverleaf model)
>WENV170017084	Trp	CCA
                   T      GTCg ttgactgcgt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        A      + + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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