The detailed information of tRNA gene sequence


Sequence ID>WENV170017102
Genome IDBARS01049935
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 365
End posion on genome 452
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatatgatcc
tRNA gene sequence 
GGAGGGGTGGGTGAGCGGCCTAAGCCGCTAGTTTGGAGAACTGGTGTACCTTCGGGTACC
GCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
acgcctgtgc
Secondary structure (Cloverleaf model)
>WENV170017102	Ser	GGA
                   c      GCCA acgcctgtgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G C G G G     C
    G         + | |                 T T
    C       A G C C
      C T A        G     TGTACCTTCGGGTACC
                    C - G
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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