The detailed information of tRNA gene sequence


Sequence ID>WENV170017103
Genome IDBARS01050234
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 539
End posion on genome 466
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttatgattaa
tRNA gene sequence 
GCGCCCGTAGCTCAGCAGGATAGAGCATCGGTTTCCTAAACCGAAGGTCAGAGGTTCGAG
TCCTCTCGGGCGTAgtt
Downstream region at tRNA end position 
gagtggatgg
Secondary structure (Cloverleaf model)
>WENV170017103	Arg	CCT
                   a      Agtt gagtggatgg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C T C C     A
      C G A        A      | | | | |     G
    A       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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