The detailed information of tRNA gene sequence


Sequence ID>WENV170017104
Genome IDBARS01050464
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 109
End posion on genome 184
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acttaatgag
tRNA gene sequence 
GAGTCGGTAGTTTAATTGGTAAAATATCGGATTCCAAACCCGAGAGATCTGGGTTCGAAT
CCTAGTCGGCTTGCCA
Downstream region at tRNA end position 
caatatatat
Secondary structure (Cloverleaf model)
>WENV170017104	Trp	CCA
                   g      GCCA caatatatat
                     G + T
                     A - T
                     G - C
                     T + G
                     C - G
                     G - C
                     G + T          T A
                    T     G A T C C     A
      T A A        A      | | + | |     G
    T       T T T G       C T G G G     C
    G       | | | +                 T T
    G       A A A T
      T A          A     GAGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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