The detailed information of tRNA gene sequence


Sequence ID>WENV170017115
Genome IDBARS01052051
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 365
End posion on genome 439
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gctgttgtat
tRNA gene sequence 
GGGCTCGTAGCTCAGCAGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCGAA
TCTACCCGGGCCCACtt
Downstream region at tRNA end position 
ttaatttgaa
Secondary structure (Cloverleaf model)
>WENV170017115	Ile	GAT
                   t      ACtt ttaatttgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C C A T C     A
      C G A        A      | | | | |     G
    A       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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