The detailed information of tRNA gene sequence


Sequence ID>WENV170017121
Genome IDBARS01053010
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 595
End posion on genome 520
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agcaaatttt
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCATCTGCTTTGCAAGCAGGGGGTCAGGGGTTCGAGT
CCCCTCATCTCCACCA
Downstream region at tRNA end position 
gccttcgcct
Secondary structure (Cloverleaf model)
>WENV170017121	Ala	TGC
                   t      ACCA gccttcgcct
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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