The detailed information of tRNA gene sequence


Sequence ID>WENV170017123
Genome IDBARS01053448
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 288
End posion on genome 197
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtgcagaca
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGCTGAAGGCGGCGGTCTTGAAAACCGCTAACTCGACTCGTCGG
GTTCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gcgtcaacgt
Secondary structure (Cloverleaf model)
>WENV170017123	Ser	TGA
                   a      GCCA gcgtcaacgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAACTCGACTCGTCGGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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