The detailed information of tRNA gene sequence


Sequence ID>WENV170017131
Genome IDBARS01054570
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 488
End posion on genome 400
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccatttctag
tRNA gene sequence 
GGAGCGTTGGCTGAGTCTGGTTTAAAGCGCCGGTTTTGAAAACCGGAGTCCCCATAAAGG
ACCGTGGGTTCGAATCCTACACGCTCCTCtt
Downstream region at tRNA end position 
aagctcacaa
Secondary structure (Cloverleaf model)
>WENV170017131	Ser	TGA
                   g      TCtt aagctcacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C A T C C     A
    C T G A        G      | | + | |     G
  T         G T C G       G T G G G     C
  G           | | |                 T T
  G         A A G C
    T T T A        G     AGTCCCCATAAAGGACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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