The detailed information of tRNA gene sequence


Sequence ID>WENV170017135
Genome IDBARS01055247
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 280
End posion on genome 208
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctgtgggttc
tRNA gene sequence 
GGGGACGTAGCTCAACTGGGAGAGCGCCGGCTTTGCAAGCCGGAGGTTGGCGGTTCGAGC
CCGCTCGTCTCCAgta
Downstream region at tRNA end position 
cgtgattcgt
Secondary structure (Cloverleaf model)
>WENV170017135	Ala	TGC
                   c      Agta cgtgattcgt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     T C G C C     A
      C A A        A      + | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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