The detailed information of tRNA gene sequence


Sequence ID>WENV170017138
Genome IDBARS01055795
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 374
End posion on genome 468
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tactttggac
tRNA gene sequence 
AGCGGGGTAGGGCAGCCTGGAGTGCCCGTCGGGCTCATAATAGGAATTACTTTGAGAAAC
CCGAAGGTCAAAGGTTCAAATCCTTTCCCCGCTACtc
Downstream region at tRNA end position 
cacttacttt
Secondary structure (Cloverleaf model)
>WENV170017138	Met	CAT
                   c      ACtc cacttacttt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T T C C     A
    C C G A        A      | | | | |     A
  T         C G G G       A A A G G     C
  G         | | | |                 T T
  G         G C C C
    A G T          G     ATTACTTTGAGAAACCCGAAGGTC
                    T - A
                    C - G
                    G   G
                    G   A
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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