The detailed information of tRNA gene sequence


Sequence ID>WENV170017159
Genome IDBARS01058868
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 123
End posion on genome 47
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaaagagag
tRNA gene sequence 
AGGTGAGTAGCTCAATTGGTTAGAGCGTCGGTCTCCAAAACCGAAGGTTGCGGGTTCGAG
TCCTGCCTCACCTGCCC
Downstream region at tRNA end position 
ataataatac
Secondary structure (Cloverleaf model)
>WENV170017159	Trp	CCA
                   g      GCCC ataataatac
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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