The detailed information of tRNA gene sequence


Sequence ID>WENV170017169
Genome IDBART01000149
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 3101
End posion on genome 3192
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgttaattt
tRNA gene sequence 
GGAGGGGTGTCTGAGTGGCTGAAAGAGATGGTCTTGAAAACCATTAAGGACCTAACGGTC
CTTCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
cttttatgta
Secondary structure (Cloverleaf model)
>WENV170017169	Ser	TGA
                   t      GCCA cttttatgta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C T       G G G G G     C
    G         | | |                 T T
    C       A A G A
      T G A        G     TAAGGACCTAACGGTCCTTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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