The detailed information of tRNA gene sequence


Sequence ID>WENV170017175
Genome IDBART01000193
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 2709
End posion on genome 2633
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actaatctta
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGCTAGAGCATGCGGTTCATACCCGCAGTGTCCTGAGTTCGAA
TCTCAGCACCGCCACCA
Downstream region at tRNA end position 
aaaatattta
Secondary structure (Cloverleaf model)
>WENV170017175	Met	CAT
                   a      ACCA aaaatattta
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G A C T C     A
      A G A        A      | | | | |     G
    T       C T C G       C T G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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