The detailed information of tRNA gene sequence


Sequence ID>WENV170017176
Genome IDBART01000197
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 64
End posion on genome 155
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgattggt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTAAGTGGCGTAAGCTG
CTTCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taaagttacc
Secondary structure (Cloverleaf model)
>WENV170017176	Ser	GGA
                   t      GCCA taaagttacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TAAGTGGCGTAAGCTGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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