The detailed information of tRNA gene sequence


Sequence ID>WENV170017177
Genome IDBART01000197
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1033
End posion on genome 1126
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccaagaatgg
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAAGCGCTCGACTCGAAATCGAGTGTACTGCCAAAAGC
AGTACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaaatgtgat
Secondary structure (Cloverleaf model)
>WENV170017177	Ser	CGA
                   g      GCCA aaaatgtgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    C G A          G     TGTACTGCCAAAAGCAGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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