The detailed information of tRNA gene sequence


Sequence ID>WENV170017178
Genome IDBART01000234
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 2114
End posion on genome 2190
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attataacaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCCTTGGTTCAAA
TCCAAGCCCCGCTACCA
Downstream region at tRNA end position 
ttatttataa
Secondary structure (Cloverleaf model)
>WENV170017178	Met	CAT
                   a      ACCA ttatttataa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A A C C     A
      T G A        G      | | | | |     A
    C       C G A G       C T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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