The detailed information of tRNA gene sequence


Sequence ID>WENV170017201
Genome IDBART01000973
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 873
End posion on genome 964
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaattaactt
tRNA gene sequence 
GGAGGAGTGCAGGAGTGGACGATCTGGCGATACTGGAAATATCGTAGGCGGTGAAAGTCG
CCTCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
attttaaaat
Secondary structure (Cloverleaf model)
>WENV170017201	Ser	GGA
                   t      GCCA attttaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G T G G G     C
    G       + | | |                 T T
    A       T C T G
      C G A        G     TAGGCGGTGAAAGTCGCCTC
                    C - G
                    G - C
                    A - T
                    T - A
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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