The detailed information of tRNA gene sequence


Sequence ID>WENV170017209
Genome IDBART01001478
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1672
End posion on genome 1747
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tctaatctgt
tRNA gene sequence 
GGCGCATTCGTCTAGCGGTCTAGGACATGGCCCTCTCAAGGCTAAAACAGGGGTTCAAGT
CCCCTATGCGCTACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170017209	Glu	CTC
                   t      ACCA nnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     AAAC
                    T - A
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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