The detailed information of tRNA gene sequence


Sequence ID>WENV170017210
Genome IDBART01001493
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 817
End posion on genome 739
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tattaataat
tRNA gene sequence 
CGGGATGTAGCGCAGCTTGGTTTAGCGCGCAGCGTTCGGGACGCTGAGGTCCGGGGTTCA
AATCCCCGCATCCCGACCA
Downstream region at tRNA end position 
taattgaaaa
Secondary structure (Cloverleaf model)
>WENV170017210	Pro	CGG
                   t      ACCA taattgaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G C C C C     A
    T C G A        A      | | | | |     A
  T         C G C G       C G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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