The detailed information of tRNA gene sequence


Sequence ID>WENV170017214
Genome IDBART01001629
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 945
End posion on genome 1017
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actaattaat
tRNA gene sequence 
GGCGGTATAGCCAAGTGGCTAAGGCGACGGTCTGCAAAACCGTTATTCACCGGTTCGAGT
CCGGTTGCCGCCTttt
Downstream region at tRNA end position 
ttttctttta
Secondary structure (Cloverleaf model)
>WENV170017214	Cys	GCA
                   t      Tttt ttttctttta
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     T G G C C     A
      T G A        A      | | | | |     G
    G       A C C G       A C C G G     C
    G         | | |                 T T
    C       A G G C
      T A          G     TATTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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