The detailed information of tRNA gene sequence


Sequence ID>WENV170017216
Genome IDBART01001837
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 836
End posion on genome 926
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaacatagtg
tRNA gene sequence 
GGAGGGGTGTCCGAATTGGCAAGGAGCCGGTCTTGAAAACCGGTGAAAGGCAGCAATGCC
CGTCTGGGTTCGAGTCCCAGTCCCTCCGCCA
Downstream region at tRNA end position 
gtgcaaccaa
Secondary structure (Cloverleaf model)
>WENV170017216	Ser	TGA
                   g      GCCA gtgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       C T G G G     C
    G         | | |                 T T
    G       A G G A
      C A          G     TGAAAGGCAGCAATGCCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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