The detailed information of tRNA gene sequence


Sequence ID>WENV170017217
Genome IDBART01002004
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 308
End posion on genome 383
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcctataggt
tRNA gene sequence 
GGAGCATTCGTCTAGGGGTCAAGGACACAGGCCTCTCACGCCTGAAACACGGGTTCGATT
CCCGTATGCTCCACCA
Downstream region at tRNA end position 
atttcatttt
Secondary structure (Cloverleaf model)
>WENV170017217	Glu	CTC
                   t      ACCA atttcatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     T - A          T T
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A A        A     AAAC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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