The detailed information of tRNA gene sequence


Sequence ID>WENV170017219
Genome IDBART01002203
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 341
End posion on genome 265
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cttattttgt
tRNA gene sequence 
GAGCCGTTAGCTCAGCTAGGTAGAGCGTCAGACTTTTAATCTGAGGGTCGCAGGTTCGAT
CCCTGTACGGCTCACCA
Downstream region at tRNA end position 
ttgtgccccc
Secondary structure (Cloverleaf model)
>WENV170017219	Lys	TTT
                   t      ACCA ttgtgccccc
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C T
                    T     T G T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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