The detailed information of tRNA gene sequence


Sequence ID>WENV170017223
Genome IDBART01002321
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 283
End posion on genome 205
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaaataaat
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTTTAGCGCGCTTGCTTTGGGAGCAAGAGGTCGGAGGTTCA
AATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tataaaacct
Secondary structure (Cloverleaf model)
>WENV170017223	Pro	TGG
                   t      ACCA tataaaacct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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