The detailed information of tRNA gene sequence


Sequence ID>WENV170017226
Genome IDBART01002334
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1159
End posion on genome 1069
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaagccctaa
tRNA gene sequence 
GGAGGGGTGTCCGAATTGGCAAGGAGCCGGTCTTGAAAACCGGTGAAAGGCAGCGATGCC
CGTCTGGGTTCGAGTCCCAGCCCCTCCGCCA
Downstream region at tRNA end position 
gtgacaccaa
Secondary structure (Cloverleaf model)
>WENV170017226	Ser	TGA
                   a      GCCA gtgacaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       C T G G G     C
    G         | | |                 T T
    G       A G G A
      C A          G     TGAAAGGCAGCGATGCCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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