The detailed information of tRNA gene sequence


Sequence ID>WENV170017228
Genome IDBART01002569
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 346
End posion on genome 420
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
catctaataa
tRNA gene sequence 
GCCGGTGTAGCTCAGTGGTAGAGCAGCTGATTTGTAATCAGCAGGTCATTGGTTCAAATC
CGATCGCCGGCTCCA
Downstream region at tRNA end position 
atttttcaat
Secondary structure (Cloverleaf model)
>WENV170017228	Thr	TGT
                   a      TCCA atttttcaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T A G C C     A
        G A        A      | | + | |     A
      T     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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