The detailed information of tRNA gene sequence


Sequence ID>WENV170017233
Genome IDBART01002912
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 525
End posion on genome 601
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttgccat
tRNA gene sequence 
AGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTCGGTTCGAA
TCCGACCCCCGCAACCA
Downstream region at tRNA end position 
gattttttaa
Secondary structure (Cloverleaf model)
>WENV170017233	Met	CAT
                   t      ACCA gattttttaa
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T C G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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