The detailed information of tRNA gene sequence


Sequence ID>WENV170017235
Genome IDBART01003061
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 601
End posion on genome 508
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acttttaaat
tRNA gene sequence 
GGAGAGATGACCGAGTGGCCGAAGGTGGTTGCCTGCTAAGCAATTGAGCGGGTTAAGGCC
TGTTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttcttatag
Secondary structure (Cloverleaf model)
>WENV170017235	Ser	GCT
                   t      GCCA tttcttatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGAGCGGGTTAAGGCCTGTTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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