The detailed information of tRNA gene sequence


Sequence ID>WENV170017249
Genome IDBART01004276
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 366
End posion on genome 275
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgattggt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTAAGTGGCGTAAGCTG
CTTCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgaatttact
Secondary structure (Cloverleaf model)
>WENV170017249	Ser	GGA
                   t      GCCA tgaatttact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TAAGTGGCGTAAGCTGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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