The detailed information of tRNA gene sequence


Sequence ID>WENV170017256
Genome IDBART01005144
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 220
End posion on genome 296
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgaatattt
tRNA gene sequence 
GTGAGTGTACCCAAGTGGTTTAAGGGACTCGTCTGCAAAACGAGTATTCATCGGTTCGAA
TCCGATCACTCACTCTA
Downstream region at tRNA end position 
acatcgggga
Secondary structure (Cloverleaf model)
>WENV170017256	Cys	GCA
                   t      TCTA acatcgggga
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    G       A C C C       A T C G G     C
    G         | | |                 T T
    T       A G G G
      T T A        A     TATTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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