The detailed information of tRNA gene sequence


Sequence ID>WENV170017260
Genome IDBART01005391
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 637
End posion on genome 561
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattttttaa
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCACACGGCTCATACCCGTGAAGTCCGAGGTTCGAA
TCCTCGCACCGCCATCA
Downstream region at tRNA end position 
aaacattcca
Secondary structure (Cloverleaf model)
>WENV170017260	Met	CAT
                   a      ATCA aaacattcca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AAGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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