The detailed information of tRNA gene sequence


Sequence ID>WENV170017269
Genome IDBART01006507
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 460
End posion on genome 387
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taaaaatttt
tRNA gene sequence 
CGGGGATTGGTGTAGAGGTAGCATGGGGCGTTTGGATCGCTTTGACGCCAGTTCGATTCT
GGCATTCCCGACCA
Downstream region at tRNA end position 
taaaaattca
Secondary structure (Cloverleaf model)
>WENV170017269	Pro	TGG
                   t      ACCA taaaaattca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A          T T
                    T     C G G T C     A
        G A        G      | | | | |     G
      A     T G T G       G C C A G     C
      G     + | | +                 T T
      G     G C A T
        T A        G     TGAC
                    G + T
                    G + T
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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