The detailed information of tRNA gene sequence


Sequence ID>WENV170017270
Genome IDBART01006507
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 375
End posion on genome 299
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaaattcat
tRNA gene sequence 
CGGGATGTGGCCAAGTCTGGTATGGCACCTGCCTTGGGAGCAGGGGATCGGTGGTTCAAA
TCCACTCATCCCGACCA
Downstream region at tRNA end position 
ctttaaatgt
Secondary structure (Cloverleaf model)
>WENV170017270	Pro	TGG
                   t      ACCA ctttaaatgt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C A C C     A
      T G A        G      + | | | |     A
    C       A C C G       G G T G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        A     GGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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