The detailed information of tRNA gene sequence


Sequence ID>WENV170017279
Genome IDBART01007409
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1194
End posion on genome 1270
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttatttaT
tRNA gene sequence 
GGAAACGTAGCTTAATTTGGTTAAAGCGTCGACCTGTCACGTCGAAGATTGCGGGTTCAA
GTCCCGTCTTTTCCGTat
Downstream region at tRNA end position 
aattcttaga
Secondary structure (Cloverleaf model)
>WENV170017279	Asp	GTC
                   T      GTat aattcttaga
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C   T
                     G - C          T G
                    T     T G C C C     A
    T T A A        A      + | | | |     A
  T         T T C G       G C G G G     C
  G         | | | |                 T T
  G         A A G C
    T T A          G     AGATT
                    T - A
                    C - G
                    G - C
                    A - T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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