The detailed information of tRNA gene sequence


Sequence ID>WENV170017281
Genome IDBART01007700
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1197
End posion on genome 1122
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgttcttgt
tRNA gene sequence 
GGGGCTGTAGTTCAATTGGGAGAACGTTTGACTGGCAGTCAAAAGGTAGGGGGTTCGAAT
CCCCCCAGCTCCACCA
Downstream region at tRNA end position 
gattttgaag
Secondary structure (Cloverleaf model)
>WENV170017281	Ala	GGC
                   t      ACCA gattttgaag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C C C C C     A
      T A A        A      | | | | |     G
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      G A          G     AGGTA
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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