The detailed information of tRNA gene sequence


Sequence ID>WENV170017284
Genome IDBART01008529
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 97
End posion on genome 172
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttcggctcac
tRNA gene sequence 
TCCTCGGTAGCTCAATCGGCAGAGCGGGTGGCTGTTAACCACTAGGTTGTAGGTTCAAGT
CCTGCCCGAGGAGCCA
Downstream region at tRNA end position 
ttttttcatt
Secondary structure (Cloverleaf model)
>WENV170017284	Asn	GTT
                   c      GCCA ttttttcatt
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | + | | |     A
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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