The detailed information of tRNA gene sequence


Sequence ID>WENV170017285
Genome IDBART01008865
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 408
End posion on genome 497
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agatgaacta
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCTATGGTGACGGTCTTGAAAACCGTTGTTCCCGCAAGGGGA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tattgaagct
Secondary structure (Cloverleaf model)
>WENV170017285	Ser	TGA
                   a      GCCA tattgaagct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGTTCCCGCAAGGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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