The detailed information of tRNA gene sequence


Sequence ID>WENV170017290
Genome IDBART01009276
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 787
End posion on genome 879
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttaataaa
tRNA gene sequence 
GGAAGTGTGCCTGAATTGGTGAAGGGACTGGTTTGCTAAACCAGCGTAGGCTTAATAGGT
CTACTGAGGGTTCGATCCCCTCCACTTCCGCCA
Downstream region at tRNA end position 
ctttaggagg
Secondary structure (Cloverleaf model)
>WENV170017290	Ser	GCT
                   a      GCCA ctttaggagg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          C T
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       G T C C       G A G G G     C
    G         + | |                 T T
    G       A G G G
      T G A        A     CGTAGGCTTAATAGGTCTACT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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