The detailed information of tRNA gene sequence


Sequence ID>WENV170017291
Genome IDBART01009276
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 964
End posion on genome 1056
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcagaatta
tRNA gene sequence 
GGAAGCGTGGCTGAGTGGCTTAAGGCGTCCGGTTTGAACCCGGATAATCTCTATAGCATA
GAGGTTCGTCAGTTCGACTCTGACCGCTTCCGCtg
Downstream region at tRNA end position 
ttttttgaca
Secondary structure (Cloverleaf model)
>WENV170017291	Ser	TGA
                   a      GCtg ttttttgaca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T C
                    T     C A G T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T C A G     C
    G         + | |                 T T
    C       A G G C
      T T A        G     TAATCTCTATAGCATAGAGGTTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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