The detailed information of tRNA gene sequence


Sequence ID>WENV170017294
Genome IDBART01009319
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 295
End posion on genome 378
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagaatactA
tRNA gene sequence 
GATAGCGTGGCGGAATTGGTATACGCGGCGTCTTCGAAAGTCGTTGTCTTCGGACGTGCA
GGTTCAAGTCCTGTCGCTATTTAtt
Downstream region at tRNA end position 
tatgtttatg
Secondary structure (Cloverleaf model)
>WENV170017294	Ser	CGA
                   A      TAtt tatgtttatg
                     G + T
                     A - T
                     T - A
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A T        G     TGTCTTCGGACGT
                    G + T
                    C - G
                    G - C
                    T   T
                    C - G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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