The detailed information of tRNA gene sequence


Sequence ID>WENV170017299
Genome IDBART01009834
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 461
End posion on genome 374
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttattatt
tRNA gene sequence 
GGAGAGGTTGCATAGTCTGGCCTAATGCGCGCGCCTGGAGAGCGCGTGAGCCGCAAGGCT
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
gaaaattggg
Secondary structure (Cloverleaf model)
>WENV170017299	Ser	GGA
                   t      GCtg gaaaattggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        T      | | | | |     G
  T         T A C G       G T G G G     C
  G         | | | |                 T T
  G         A T G C
    C C T A        G     TGAGCCGCAAGGCTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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