The detailed information of tRNA gene sequence


Sequence ID>WENV170017309
Genome IDBART01011278
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 329
End posion on genome 235
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagttaagat
tRNA gene sequence 
GGAGAGGTGGCTGAGCCCGGCTGAAAGCGCTCGACTCGAAATCGAGTAGGCGGGTAGTCC
CTGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaatcaatg
Secondary structure (Cloverleaf model)
>WENV170017309	Ser	CGA
                   t      GCCA aaaatcaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  C         G T C G       G C G G G     C
  G           | | |                 T T
  G         A A G C
    C T G A        G     TAGGCGGGTAGTCCCTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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