The detailed information of tRNA gene sequence


Sequence ID>WENV170017311
Genome IDBART01011378
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 613
End posion on genome 523
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaacaaaaaT
tRNA gene sequence 
AGCGAGATGGCTGAGTCAGGTTTAAAGCGGCGGTCTTGAAAACCGTTAAGCCGAGAGGCT
TCAAGAGTTCGAATCTCTTTCTCGCTGCCC
Downstream region at tRNA end position 
tacaggaaat
Secondary structure (Cloverleaf model)
>WENV170017311	Ser	TGA
                   T      GCCC tacaggaaat
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C T C     A
    C T G A        G      | | | | |     G
  A         G T C G       A A G A G     C
  G           | | |                 T T
  G         A A G C
    T T T A        G     TAAGCCGAGAGGCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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