The detailed information of tRNA gene sequence


Sequence ID>WENV170017313
Genome IDBART01011400
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 186
End posion on genome 96
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttattatttt
tRNA gene sequence 
GGAGAGATGGCTGAGGGGATTAAAGCAGCGGTCTCGAAAACCGTTAAGGGTTAATAGCCC
TTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gttggaaaat
Secondary structure (Cloverleaf model)
>WENV170017313	Ser	CGA
                   t      GCCA gttggaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      G G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    A       A A G C
      T T A        A     TAAGGGTTAATAGCCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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