The detailed information of tRNA gene sequence


Sequence ID>WENV170017315
Genome IDBART01011845
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 777
End posion on genome 706
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttaaagtg
tRNA gene sequence 
CGGGGTATAGTGTAACGGCAGCACGAGTCCTTTGGGAGGATTTAGTCCCAGTTCGAATCT
GGGTACCCCGACtg
Downstream region at tRNA end position 
cgggtgtcgt
Secondary structure (Cloverleaf model)
>WENV170017315	Pro	TGG
                   g      ACtg cgggtgtcgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     G G G T C     A
        A A        A      | | | | |     G
      C     T G T G       C C C A G     C
      G     + | | |                 T T
      G     G C A C
        C A        G     TAGT
                    A - T
                    G + T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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