The detailed information of tRNA gene sequence


Sequence ID>WENV170017317
Genome IDBART01011848
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 765
End posion on genome 690
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgctgagt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGAAGAGCAGCGGTCTCCAAAACCGCAGGGCGGGGGTTCGAGT
CCTCCCACTCCTGCCA
Downstream region at tRNA end position 
attttgtttg
Secondary structure (Cloverleaf model)
>WENV170017317	Trp	CCA
                   t      GCCA attttgtttg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     AGGGC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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