The detailed information of tRNA gene sequence


Sequence ID>WENV170017318
Genome IDBART01012188
Search identical group
Phylum/Class[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 260
End posion on genome 187
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tccccaaaaa
tRNA gene sequence 
GGGAGAGTGGCTTAGCCTGGTATAGCGCACGGCTGATAACCGTGAGGTCGGGGGTTCGAA
GCCCCCCTTTCCCAtta
Downstream region at tRNA end position 
ttttttcata
Secondary structure (Cloverleaf model)
>WENV170017318	Ile	GAT
                   a      Atta ttttttcata
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C          G A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    C       T T C G       G G G G G     C
    T         | | |                 T T
    G       T A G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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